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Tools for protein analyses
various ONLINE-Tools (JustBio)
3D-Structure Comparisons
Arabidopsis membrane protein database: ARAMEMNON
Arabidopsis Membrane Protein Library (John Ward)
Chloroplast Transit Peptide: Prediction
ELM (Eucariotic Linear Motif) prediction
ExPASy: Proteomics Tools
Helical Wheel Drawing
Mitochondrial and Plastidic Targeting Sequences: Prediction
Mitochondrial Targeting Sequence Prediction
Multiple Sequence Alignment (ClustalW)
Multiple Sequence Alignment (Malign)
Peroxysomal Targeting: Prediction
Phosphorylation (Serine, Threonine, Tyrosine) Prediction
Prediction of protein subcellular localization (PSORT)
Phylogeney Analysis - PhyML
Rice Membrane Protein Library (John Ward)
SALK T-DNA Insertion Lines
Secondary Structure Prediction (UCSF)
Secondary Structure Prediction (PSIPRED)
Secondary Structure Prediction (The Predict Protein Server / Offers and Uses Multiple Prediction Services)
Secondary Structure Prediction (Jpred)
Signal Peptides: Prediction of Cleaveage Sites
Translation of DNA Sequences into Protein Sequences
Transmembrane Helices: Prediction of location and topology (CBS; Denmark)
Transmembrane Helices: Prediction of location and topology (Columbia University)
Transmembrane Helices: Prediction of location and topology (TMpred)
WEB-Site offering Multiple Other Proteomics Tools
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www.MPP-Erlangen.de
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